Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | PEDSA_RS16860 | Not Available | Positive | 3986526 - 3989753 | 118982.0 |
| ragb/susd family nutrient uptake outer membrane protein | PEDSA_RS16865 | Not Available | Positive | 3989764 - 3991611 | 69334.5 |
| duf5123 domain-containing protein | PEDSA_RS16870 | Not Available | Positive | 3991633 - 3993243 | 58623.1 |
| pectate lyase | PEDSA_RS16875 | Not Available | Positive | 3993309 - 3994823 | 54794.0 |
| hypothetical protein | PEDSA_RS16880 | Not Available | Positive | 3994882 - 3996294 | 51571.6 |
| rhamnogalacturonan acetylesterase | PEDSA_RS16885 | Not Available | Positive | 3996272 - 3997021 | 28265.9 |
| pectinesterase family protein | PEDSA_RS16890 | Not Available | Positive | 3997629 - 3998594 | 36178.9 |
| dna-binding domain-containing protein | PEDSA_RS16895 | Not Available | Negative | 3998855 - 3999589 | 26640.0 |
| hypothetical protein | PEDSA_RS20605 | Not Available | Positive | 4000005 - 4000052 | 1785.26 |
| ankyrin repeat domain-containing protein | PEDSA_RS16900 | Not Available | Positive | 4000124 - 4000951 | 29819.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.