Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine--8-amino-7-oxononanoate transaminase | PEDSA_RS16755 | Not Available | Negative | 3964432 - 3965700 | 47626.5 |
| biotin synthase biob | PEDSA_RS16760 | Not Available | Negative | 3965685 - 3966680 | 37058.4 |
| dethiobiotin synthase | PEDSA_RS16765 | Not Available | Negative | 3966689 - 3967300 | 23170.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | PEDSA_RS16770 | Not Available | Negative | 3967293 - 3968408 | 41727.2 |
| hypothetical protein | PEDSA_RS16775 | Not Available | Negative | 3968380 - 3969012 | 24762.6 |
| plp-dependent aminotransferase family protein | PEDSA_RS16780 | Not Available | Positive | 3969077 - 3970552 | 56482.2 |
| Trna-glu | Not Available | Not Available | Positive | 3970658 - 3970732 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3970759 - 3970834 | Not Available |
| gtpase era | PEDSA_RS16795 | Not Available | Positive | 3970979 - 3971857 | 33445.4 |
| ribosome biogenesis gtpase der | PEDSA_RS16800 | Not Available | Positive | 3971966 - 3973267 | 48853.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.