Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2752 domain-containing protein | PEDSA_RS16650 | Not Available | Negative | 3935053 - 3935331 | 10749.3 |
| duf4199 domain-containing protein | PEDSA_RS16655 | Not Available | Negative | 3935331 - 3935729 | 14838.7 |
| transcription-repair coupling factor | PEDSA_RS16660 | Not Available | Positive | 3935926 - 3939276 | 128055.0 |
| hypothetical protein | PEDSA_RS16665 | Not Available | Negative | 3939322 - 3940224 | 33406.7 |
| glycoside hydrolase family 10 protein | PEDSA_RS16670 | Not Available | Positive | 3940453 - 3942009 | 59510.2 |
| gfo/idh/moca family oxidoreductase | PEDSA_RS16675 | Not Available | Positive | 3942024 - 3943037 | 38319.6 |
| Trna-asp | Not Available | Not Available | Positive | 3943139 - 3943212 | Not Available |
| outer membrane beta-barrel protein | PEDSA_RS20600 | Not Available | Positive | 3943602 - 3943829 | 8719.55 |
| glycoside hydrolase family 18 protein | PEDSA_RS16695 | Not Available | Positive | 3944015 - 3945019 | 37566.1 |
| rna polymerase sigma-70 factor | PEDSA_RS16700 | Not Available | Positive | 3945188 - 3945787 | 23723.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.