Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porp/sprf family type ix secretion system membrane protein | PEDSA_RS12105 | Not Available | Negative | 2802187 - 2803062 | 32710.5 |
| phytanoyl-coa dioxygenase (phyh) family protein | PEDSA_RS12150 | Not Available | Negative | 2820295 - 2821272 | 36500.1 |
| sensor histidine kinase | PEDSA_RS12155 | Not Available | Positive | 2821576 - 2823525 | 74997.6 |
| dna-binding response regulator | PEDSA_RS12160 | Not Available | Positive | 2823528 - 2824139 | 23023.2 |
| hypothetical protein | PEDSA_RS12165 | Not Available | Negative | 2824253 - 2824969 | 26084.4 |
| hypothetical protein | PEDSA_RS12170 | Not Available | Negative | 2824974 - 2827646 | 99987.1 |
| hypothetical protein | PEDSA_RS12175 | Not Available | Negative | 2827673 - 2829271 | 60111.1 |
| porp/sprf family type ix secretion system membrane protein | PEDSA_RS12180 | Not Available | Negative | 2829711 - 2830589 | 32835.8 |
| ydg domain-containing protein | PEDSA_RS12185 | Not Available | Negative | 2830709 - 2837380 | 226107.0 |
| helix-turn-helix domain-containing protein | PEDSA_RS12190 | Not Available | Negative | 2837634 - 2838659 | 39460.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.