Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | PEDSA_RS11840 | Not Available | Positive | 2734616 - 2736010 | 50173.9 |
| 3-isopropylmalate dehydratase small subunit | PEDSA_RS11845 | Not Available | Positive | 2736115 - 2736711 | 22330.3 |
| alpha-isopropylmalate synthase regulatory domain-containing protein | PEDSA_RS11850 | Not Available | Positive | 2736863 - 2738383 | 56354.4 |
| 3-isopropylmalate dehydrogenase | PEDSA_RS11855 | Not Available | Positive | 2738479 - 2739537 | 38444.9 |
| threonine ammonia-lyase ilva | PEDSA_RS11860 | Not Available | Positive | 2739659 - 2740894 | 45647.3 |
| abc transporter atp-binding protein | PEDSA_RS11865 | Not Available | Negative | 2740891 - 2741859 | 35912.5 |
| outer membrane beta-barrel protein | PEDSA_RS11870 | Not Available | Negative | 2741946 - 2742752 | 30741.6 |
| hypothetical protein | PEDSA_RS11875 | Not Available | Negative | 2742754 - 2743473 | 27755.8 |
| rna polymerase sigma factor | PEDSA_RS11880 | Not Available | Negative | 2743454 - 2744026 | 21971.8 |
| gh3 auxin-responsive promoter family protein | PEDSA_RS11885 | Not Available | Negative | 2744105 - 2745619 | 58550.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.