Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PEDSA_RS09385 | Not Available | Positive | 2206480 - 2206719 | 8686.86 |
| hypothetical protein | PEDSA_RS09395 | Not Available | Negative | 2207025 - 2207537 | 19711.9 |
| xre family transcriptional regulator | PEDSA_RS09400 | Not Available | Negative | 2207574 - 2208638 | 40697.0 |
| yegp family protein | PEDSA_RS09405 | Not Available | Positive | 2208900 - 2209226 | 11831.7 |
| duf2188 domain-containing protein | PEDSA_RS09410 | Not Available | Positive | 2209244 - 2209465 | 8232.76 |
| pycsar system effector family protein | PEDSA_RS09415 | Not Available | Positive | 2209475 - 2209978 | 19099.3 |
| adenylate/guanylate cyclase domain-containing protein | PEDSA_RS19565 | Not Available | Positive | 2209984 - 2211009 | 39393.3 |
| sec-c metal-binding domain-containing protein | PEDSA_RS09425 | Not Available | Positive | 2210978 - 2211658 | 26338.6 |
| type i restriction endonuclease subunit r | PEDSA_RS09430 | Not Available | Negative | 2211688 - 2214714 | 115973.0 |
| restriction modification system dna specificity domain-containing protein | PEDSA_RS09435 | Not Available | Negative | 2214762 - 2216036 | 48794.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.