Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pseudopedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pseudopedobacter |
| Species | Pseudopedobacter saltans |
| Strain | DSM 12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1475049 bp
Thymine Count
1464498 bp
Guanine Count
854045 bp
Cytosine Count
841644 bp
Genome Length
4635236 bp
Protein-coding Genes
3792 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | PEDSA_RS00880 | Not Available | Negative | 217562 - 218110 | 21695.0 |
| transketolase family protein | PEDSA_RS00885 | Not Available | Negative | 218176 - 219129 | 34378.6 |
| transketolase | PEDSA_RS00890 | Not Available | Negative | 219159 - 220004 | 30674.6 |
| collagen-like protein | PEDSA_RS19375 | Not Available | Positive | 220210 - 222738 | 86017.8 |
| gliding motility-associated c-terminal domain-containing protein | PEDSA_RS00900 | Not Available | Positive | 222739 - 223920 | 44214.0 |
| type ix secretion system membrane protein porp/sprf | PEDSA_RS00905 | Not Available | Positive | 223920 - 224879 | 36223.9 |
| ompa family protein | PEDSA_RS00910 | Not Available | Positive | 224881 - 226887 | 75799.6 |
| dead/deah box helicase | PEDSA_RS00915 | Not Available | Positive | 226951 - 228177 | 46284.4 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 228261 - 228359 | Not Available |
| fructose-6-phosphate aldolase | PEDSA_RS00920 | Not Available | Positive | 228544 - 229203 | 23377.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.