Pseudopedobacter saltans DSM 12145

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pseudopedobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPseudopedobacter
SpeciesPseudopedobacter saltans
StrainDSM 12145

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudopedobacter saltans DSM 12145, complete sequence.

Gene Summary

Adenine Count

1475049 bp

Thymine Count

1464498 bp

Guanine Count

854045 bp

Cytosine Count

841644 bp

Genome Length

4635236 bp

Protein-coding Genes

3792 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sterol desaturase family proteinPEDSA_RS07120Not AvailablePositive1674220 - 167517637604.2
t9ss type a sorting domain-containing proteinPEDSA_RS07125Not AvailableNegative1675212 - 167624940086.1
efflux rnd transporter permease subunitPEDSA_RS07130Not AvailableNegative1676339 - 1680877166579.0
efflux rnd transporter periplasmic adaptor subunitPEDSA_RS07135Not AvailableNegative1680904 - 168204642202.6
hypothetical proteinPEDSA_RS07140Not AvailableNegative1682184 - 168255214318.4
nadp-dependent isocitrate dehydrogenasePEDSA_RS07145Not AvailableNegative1682689 - 168490879563.1
glycosyltransferase family 9 proteinPEDSA_RS07155Not AvailableNegative1685437 - 168642937262.6
glycosyltransferase family 2 proteinPEDSA_RS07160Not AvailableNegative1686436 - 168740737130.9
carbamoyltransferasePEDSA_RS07165Not AvailableNegative1687328 - 168912767919.4
atp-binding proteinPEDSA_RS07170Not AvailablePositive1689369 - 169151681978.1

Displaying genes 1441 – 1450 of 3866 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.