Rhodothermus marinus SG0.5JP17-172

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Rhodothermota

Class

Rhodothermia

Order

Rhodothermales

Family

Rhodothermaceae

Genus

Rhodothermus

Description

Rhodothermus marinus is a thermohalophilic bacterium and is the only validly described species in the genus Rhodothermus. It is aerobic, chemoorganotrophic, has been isolated from marine habitats and grows from 54 to 77 degrees Celsius with optimal growth at 65 degrees Celsius. It grows best in 2% NaCl although growth can occur from 0.5% NaCl to over 6% NaCl. Thus it is therefore both thermophilic and slightly but strictly halophilic and can only grow in a very narrow zone in the submarine hot springs, close to their openings, determined by temperature and salt concentration as well as of content of O2 and organic material.Strain DSM 4252 (the type strain) was isolated in 1988 at 2-3m depth (at low tide) from a submarine hot spring at Reykjanes, Isafjardardjup Bay, off the south-west coast of Iceland (adapted from PMID 16075163 and J.Gen.Microbiol 134:299). Cells are 0.5 um in diameter and 2-2.5 um long, without flagella, non-spore forming and without lipid granules, although they form a slime capsule when grown in rich-media (adapted from 10.4056.sigs46736). (HAMAP: RHOM4)

Taxonomy

KingdomPseudomonadati
PhylumRhodothermota
ClassRhodothermia
OrderRhodothermales
FamilyRhodothermaceae
GenusRhodothermus
SpeciesRhodothermus marinus
StrainSG0.5JP17-172

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Rhodothermus marinus SG0.5JP17-172
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature65
Temperature rangeThermophilic
HabitatMarine - Hot spring
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete

Gene Summary

Adenine Count

21367 bp

Thymine Count

21356 bp

Guanine Count

30922 bp

Cytosine Count

31804 bp

Genome Length

105449 bp

Protein-coding Genes

96 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRHOM172_RS14335Not AvailablePositive42291 - 4316033631.5
transposaseRHOM172_RS15795Not AvailablePositive43280 - 434094924.06
transposaseRHOM172_RS15145Not AvailableNegative43492 - 4388114676.4
rna-guided endonuclease insq/tnpb family proteinRHOM172_RS14760Not AvailablePositive44555 - 4608458052.6
atp-binding proteinRHOM172_RS14350Not AvailableNegative48257 - 4944745775.4
type iii-a crispr-associated ramp protein csm5RHOM172_RS14355Not AvailableNegative50994 - 5264663350.5
type iii-a crispr-associated ramp protein csm4RHOM172_RS14360Not AvailableNegative52665 - 5368438795.8
type iii-a crispr-associated ramp protein csm3RHOM172_RS14365Not AvailableNegative53681 - 5447529909.4
type iii-a crispr-associated protein csm2RHOM172_RS14370Not AvailableNegative54492 - 5487214484.5
type iii-a crispr-associated protein cas10/csm1RHOM172_RS14375Not AvailableNegative54902 - 5711582588.1

Displaying genes 41 – 50 of 97 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.