Salinibacter ruber M8

Kingdom

Pseudomonadati

Phylum

Rhodothermota

Class

Rhodothermia

Order

Rhodothermales

Family

Salinibacteraceae

Genus

Salinibacter

Description

Taxonomy

KingdomPseudomonadati
PhylumRhodothermota
ClassRhodothermia
OrderRhodothermales
FamilySalinibacteraceae
GenusSalinibacter
SpeciesSalinibacter ruber
StrainM8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salinibacter ruber M8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcrystallizer pond
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinibacter ruber M8 plasmid pSR11, complete sequence.

Gene Summary

Adenine Count

2350 bp

Thymine Count

1772 bp

Guanine Count

3668 bp

Cytosine Count

3439 bp

Genome Length

11229 bp

Protein-coding Genes

14 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit uvraSRM_RS03155Not AvailableNegative640851 - 643796108520.0
pqq-dependent sugar dehydrogenaseSRM_RS03160Not AvailablePositive644059 - 64525243130.2
hypothetical proteinSRM_RS15950Not AvailableNegative645313 - 64613428501.6
m23 family metallopeptidaseSRM_RS03170Not AvailableNegative646285 - 64724734569.8
flavin reductaseSRM_RS03175Not AvailablePositive647448 - 64806822766.0
m20 family metallopeptidaseSRM_RS03180Not AvailablePositive648114 - 64935543794.9
hypothetical proteinSRM_RS03185Not AvailablePositive649405 - 65045137405.6
isoleucine--trna ligaseSRM_RS03190Not AvailablePositive650657 - 653899122772.0
trar/dksa c4-type zinc finger proteinSRM_RS03195Not AvailablePositive653978 - 65445417852.7
holliday junction branch migration protein ruvaSRM_RS03200Not AvailablePositive654620 - 65522822126.9

Displaying genes 661 – 670 of 3236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039658Bifidobacterium pseudocatenulatumNot availableNot availableNot available
BASm0039669Erysipelotrichaceae bacterium 21_3Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.