Salinibacter ruber M8

Kingdom

Pseudomonadati

Phylum

Rhodothermota

Class

Rhodothermia

Order

Rhodothermales

Family

Salinibacteraceae

Genus

Salinibacter

Description

Taxonomy

KingdomPseudomonadati
PhylumRhodothermota
ClassRhodothermia
OrderRhodothermales
FamilySalinibacteraceae
GenusSalinibacter
SpeciesSalinibacter ruber
StrainM8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Salinibacter ruber M8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcrystallizer pond
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salinibacter ruber M8 plasmid pSR11, complete sequence.

Gene Summary

Adenine Count

2350 bp

Thymine Count

1772 bp

Guanine Count

3668 bp

Cytosine Count

3439 bp

Genome Length

11229 bp

Protein-coding Genes

14 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma factorSRM_RS15230Not AvailablePositive3483279 - 348385121920.6
isoamylaseSRM_RS16105Not AvailablePositive3483832 - 348453024857.9
glycogen-binding domain-containing proteinSRM_RS15240Not AvailablePositive3484576 - 348576943083.7
hypothetical proteinSRM_RS15245Not AvailablePositive3485774 - 348680234320.6
isoaspartyl peptidase/l-asparaginase family proteinSRM_RS15250Not AvailableNegative3486822 - 348803341999.1
rna polymerase sigma factorSRM_RS15255Not AvailablePositive3488260 - 348892526182.0
duf971 domain-containing proteinSRM_RS15260Not AvailablePositive3489068 - 348939111674.5
dead/deah box helicaseSRM_RS15270Not AvailableNegative3489643 - 349138865646.5
dpp iv n-terminal domain-containing proteinSRM_RS15275Not AvailableNegative3491599 - 349418197366.0
1,4-dihydroxy-2-naphthoyl-coa synthaseSRM_RS15280Not AvailableNegative3494505 - 349539832651.9

Displaying genes 3121 – 3130 of 3236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039658Bifidobacterium pseudocatenulatumNot availableNot availableNot available
BASm0039669Erysipelotrichaceae bacterium 21_3Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.