Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Accession NumberNC_015695.1
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | RUNSL_RS01450 | Not Available | - | 350441 - 351091 | 24377.6 |
| penicillin acylase family protein | RUNSL_RS01455 | Not Available | + | 351355 - 353472 | 78463.7 |
| hypothetical protein | RUNSL_RS01460 | Not Available | + | 353560 - 353841 | 10744.5 |
| sbbp repeat-containing protein | RUNSL_RS01465 | Not Available | + | 353877 - 355046 | 40394.3 |
| gdsl-type esterase/lipase family protein | RUNSL_RS01470 | Not Available | + | 355459 - 356688 | 45238.6 |
| pvc-type heme-binding cxxch protein | RUNSL_RS01475 | Not Available | + | 356712 - 360176 | 126126.0 |
| response regulator | RUNSL_RS01480 | Not Available | - | 360259 - 360723 | 18288.1 |
| tonb-dependent receptor | RUNSL_RS01485 | Not Available | + | 361602 - 364637 | 110990.0 |
| ragb/susd family nutrient uptake outer membrane protein | RUNSL_RS01490 | Not Available | + | 364695 - 366068 | 50813.8 |
| hypothetical protein | RUNSL_RS01495 | Not Available | + | 366114 - 367457 | 51588.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.