Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Accession NumberNC_015695.1
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | RUNSL_RS01300 | Not Available | - | 315839 - 316597 | 29230.2 |
| dead/deah box helicase | RUNSL_RS01305 | Not Available | - | 316649 - 320014 | 130157.0 |
| adenylate/guanylate cyclase domain-containing protein | RUNSL_RS01310 | Not Available | - | 320159 - 321208 | 39345.7 |
| response regulator | RUNSL_RS01315 | Not Available | - | 321205 - 321579 | 14262.1 |
| iron-containing alcohol dehydrogenase | RUNSL_RS01320 | Not Available | + | 321698 - 322852 | 41881.5 |
| helix-turn-helix domain-containing protein | RUNSL_RS01325 | Not Available | - | 323116 - 323460 | 13397.5 |
| marr family winged helix-turn-helix transcriptional regulator | RUNSL_RS01330 | Not Available | + | 323744 - 324115 | 14186.0 |
| hypothetical protein | RUNSL_RS01335 | Not Available | + | 324338 - 324697 | 13316.2 |
| pirin family protein | RUNSL_RS01340 | Not Available | + | 324694 - 325401 | 26035.9 |
| type 1 glutamine amidotransferase domain-containing protein | RUNSL_RS01345 | Not Available | + | 325560 - 326318 | 27162.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.