Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Accession NumberNC_015695.1
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | RUNSL_RS01255 | Not Available | - | 304499 - 305026 | 20587.4 |
| abc transporter atp-binding protein | RUNSL_RS01260 | Not Available | + | 305180 - 306061 | 32116.9 |
| m1 family aminopeptidase | RUNSL_RS01265 | Not Available | + | 306083 - 309748 | 139537.0 |
| duf418 domain-containing protein | RUNSL_RS30115 | Not Available | - | 310138 - 310494 | 13698.7 |
| hypothetical protein | RUNSL_RS30550 | Not Available | - | 310409 - 310717 | 11428.0 |
| hypothetical protein | RUNSL_RS30120 | Not Available | - | 310656 - 311159 | 18900.9 |
| sugar phosphate isomerase/epimerase | RUNSL_RS01280 | Not Available | + | 311325 - 312251 | 34999.9 |
| radical sam/spasm domain-containing protein | RUNSL_RS01285 | Not Available | + | 312375 - 313397 | 39522.1 |
| sdr family oxidoreductase | RUNSL_RS01290 | Not Available | + | 313629 - 314420 | 28401.0 |
| l-fucose:h+ symporter permease | RUNSL_RS01295 | Not Available | + | 314491 - 315708 | 44020.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.