Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Accession NumberNC_015695.1
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase | RUNSL_RS31295 | Not Available | - | 270010 - 270672 | 26383.4 |
| hypothetical protein | RUNSL_RS31300 | Not Available | - | 270698 - 271357 | 25336.0 |
| nad(p)h-binding protein | RUNSL_RS01115 | Not Available | - | 271466 - 272350 | 31418.5 |
| tetr/acrr family transcriptional regulator | RUNSL_RS01120 | Not Available | - | 272430 - 273017 | 22457.0 |
| circularly permuted type 2 atp-grasp protein | RUNSL_RS01125 | Not Available | - | 273128 - 274558 | 53868.7 |
| duf5723 family protein | RUNSL_RS01130 | Not Available | + | 274793 - 276334 | 57787.6 |
| enoyl-coa hydratase/isomerase family protein | RUNSL_RS01135 | Not Available | + | 276342 - 277106 | 27280.6 |
| endonuclease/exonuclease/phosphatase family protein | RUNSL_RS01140 | Not Available | - | 277108 - 278040 | 35745.9 |
| replication-associated recombination protein a | RUNSL_RS01145 | Not Available | - | 278025 - 279287 | 46811.6 |
| rna polymerase sigma factor | RUNSL_RS01150 | Not Available | - | 279416 - 279997 | 22979.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.