Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Accession NumberNC_015695.1
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plastocyanin/azurin family copper-binding protein | RUNSL_RS01060 | Not Available | + | 255225 - 256310 | 39635.4 |
| hypothetical protein | RUNSL_RS01065 | Not Available | + | 256358 - 257860 | 56290.6 |
| family 16 glycosylhydrolase | RUNSL_RS01070 | Not Available | - | 257861 - 258700 | 33144.3 |
| mandelate racemase/muconate lactonizing enzyme family protein | RUNSL_RS01075 | Not Available | - | 258906 - 259985 | 39622.7 |
| duf1611 domain-containing protein | RUNSL_RS01080 | Not Available | - | 260033 - 261094 | 38767.0 |
| serine hydrolase | RUNSL_RS01085 | Not Available | - | 261178 - 263709 | 93854.9 |
| lrp/asnc family transcriptional regulator | RUNSL_RS01090 | Not Available | + | 263918 - 264373 | 17269.2 |
| amidohydrolase family protein | RUNSL_RS01095 | Not Available | + | 264496 - 267531 | 111528.0 |
| amidohydrolase family protein | RUNSL_RS01100 | Not Available | + | 267601 - 268965 | 49648.5 |
| duf4412 domain-containing protein | RUNSL_RS01105 | Not Available | - | 269049 - 269777 | 26662.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.