Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Accession NumberNC_015695.1
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa desaturase | RUNSL_RS00915 | Not Available | + | 222136 - 222888 | 30091.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | RUNSL_RS00920 | Not Available | - | 222983 - 223864 | 31392.3 |
| nad-dependent deacylase | RUNSL_RS00925 | Not Available | - | 224008 - 224712 | 26193.7 |
| alpha/beta fold hydrolase | RUNSL_RS00930 | Not Available | - | 224648 - 225673 | 38464.4 |
| argininosuccinate synthase | RUNSL_RS00935 | Not Available | - | 225767 - 226966 | 44403.8 |
| gnat family n-acetyltransferase | RUNSL_RS00940 | Not Available | - | 227347 - 228057 | 27233.0 |
| pqq-dependent sugar dehydrogenase | RUNSL_RS00945 | Not Available | + | 228572 - 231292 | 100486.0 |
| hypothetical protein | RUNSL_RS00950 | Not Available | + | 231662 - 233074 | 54425.2 |
| m23 family metallopeptidase | RUNSL_RS00955 | Not Available | - | 233163 - 233909 | 27663.1 |
| smp-30/gluconolactonase/lre family protein | RUNSL_RS00960 | Not Available | - | 233917 - 234828 | 33373.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.