Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Accession NumberNC_015695.1
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gh3 auxin-responsive promoter family protein | RUNSL_RS00760 | Not Available | - | 187192 - 188769 | 60379.3 |
| 5'/3'-nucleotidase sure | RUNSL_RS00765 | Not Available | - | 188880 - 189677 | 29087.7 |
| cation-translocating p-type atpase | RUNSL_RS00770 | Not Available | + | 189953 - 192169 | 79750.4 |
| heavy-metal-associated domain-containing protein | RUNSL_RS00775 | Not Available | + | 192251 - 192460 | 7604.94 |
| exo-alpha-sialidase | RUNSL_RS00780 | Not Available | + | 193117 - 194307 | 44264.7 |
| sulfatase | RUNSL_RS00785 | Not Available | + | 194511 - 196025 | 58652.8 |
| is630 family transposase | RUNSL_RS31285 | Not Available | - | 196550 - 197074 | 19960.4 |
| winged helix-turn-helix domain-containing protein | RUNSL_RS31290 | Not Available | - | 197085 - 197561 | 18040.0 |
| rhodanese-related sulfurtransferase | RUNSL_RS00800 | Not Available | - | 198023 - 198997 | 36785.9 |
| deoxynucleoside kinase | RUNSL_RS00805 | Not Available | + | 199249 - 199863 | 24012.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.