Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Accession NumberNC_015695.1
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrous oxide reductase accessory protein nosl | RUNSL_RS00565 | Not Available | + | 149661 - 150695 | 38710.6 |
| nitrous oxide reductase family maturation protein nosd | RUNSL_RS00570 | Not Available | + | 150857 - 152128 | 47833.4 |
| abc transporter atp-binding protein | RUNSL_RS00575 | Not Available | + | 152210 - 152962 | 27698.7 |
| abc transporter permease subunit | RUNSL_RS00580 | Not Available | + | 152959 - 153726 | 28412.8 |
| fasciclin domain-containing protein | RUNSL_RS00585 | Not Available | + | 153811 - 154359 | 19137.8 |
| cupin domain-containing protein | RUNSL_RS29240 | Not Available | + | 154371 - 154661 | 10721.8 |
| hypothetical protein | RUNSL_RS29245 | Not Available | + | 154782 - 155171 | 14869.2 |
| hypothetical protein | RUNSL_RS00600 | Not Available | + | 155255 - 155695 | 16574.2 |
| tonb-dependent receptor | RUNSL_RS00605 | Not Available | + | 155692 - 158058 | 88181.2 |
| exo-alpha-sialidase | RUNSL_RS00610 | Not Available | + | 158167 - 159366 | 43927.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.