Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Accession NumberNC_015695.1
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thua domain-containing protein | RUNSL_RS27985 | Not Available | + | 73496 - 74473 | 36675.1 |
| sgnh/gdsl hydrolase family protein | RUNSL_RS27990 | Not Available | + | 74536 - 75786 | 46133.9 |
| pas domain s-box protein | RUNSL_RS29940 | Not Available | - | 75955 - 78996 | 115517.0 |
| hypothetical protein | RUNSL_RS28000 | Not Available | - | 79450 - 79926 | 17696.0 |
| methyltransferase | RUNSL_RS28005 | Not Available | + | 80162 - 81226 | 38687.5 |
| inositol-3-phosphate synthase | RUNSL_RS28010 | Not Available | + | 81503 - 82840 | 49757.9 |
| sialate o-acetylesterase | RUNSL_RS28015 | Not Available | - | 83303 - 85975 | 100809.0 |
| endo-1,4-beta-xylanase | RUNSL_RS28020 | Not Available | - | 86016 - 87158 | 43297.9 |
| glycoside hydrolase family 43 protein | RUNSL_RS28025 | Not Available | - | 87218 - 88252 | 38670.9 |
| mfs transporter | RUNSL_RS28030 | Not Available | - | 88437 - 89855 | 52688.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.