Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cannabina |
| Strain | pv. alisalensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1240775 bp
Thymine Count
1238714 bp
Guanine Count
1760399 bp
Cytosine Count
1758280 bp
Genome Length
6023770 bp
Protein-coding Genes
4941 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter | ALQ52_03909 | Not Available | Negative | 665891 - 667123 | 43506.4 |
| type iii effector hopag1 | ALQ52_04135 | Not Available | Negative | 667124 - 667366 | 8855.41 |
| peptidase | ALQ52_00897 | Not Available | Negative | 667551 - 667772 | 8013.13 |
| type iv pilus assembly protein pilm | ALQ52_00898 | Not Available | Positive | 667979 - 669043 | 38108.9 |
| type 4 fimbrial bioproteinsis protein piln | ALQ52_00899 | Not Available | Positive | 669043 - 669618 | 21585.3 |
| type iv pilus bioproteinsis protein pilo | ALQ52_101218 | Not Available | Positive | 669615 - 670238 | 23254.2 |
| type iv pilus bioproteinsis protein pilq | ALQ52_00900 | Not Available | Positive | 670759 - 672888 | 76259.3 |
| shikimate kinase | ALQ52_00901 | Not Available | Positive | 672920 - 673411 | 18151.0 |
| 3-dehydroquinate synthase | ALQ52_03639 | Not Available | Positive | 673528 - 674631 | 40085.6 |
| hypothetical protein | ALQ52_00902 | Not Available | Positive | 674642 - 676273 | 56093.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
