Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cannabina |
| Strain | pv. alisalensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1240775 bp
Thymine Count
1238714 bp
Guanine Count
1760399 bp
Cytosine Count
1758280 bp
Genome Length
6023770 bp
Protein-coding Genes
4941 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase associated protein rapa | ALQ52_103090 | Not Available | Negative | 4106100 - 4109006 | 108649.0 |
| type iii effector hoppmah | ALQ52_01387 | Not Available | Negative | 4109998 - 4110912 | 32896.0 |
| type iii effector hopbf1 | ALQ52_102666 | Not Available | Positive | 4112430 - 4112807 | 14299.0 |
| tnpa transposase | ALQ52_02108 | Not Available | Negative | 4112804 - 4113079 | 10093.2 |
| hypothetical protein | ALQ52_101499 | Not Available | Positive | 4113080 - 4113325 | 8839.73 |
| /hemophilus virulence surface antigen family | ALQ52_04020 | Not Available | Negative | 4113978 - 4114386 | 14817.1 |
| hypothetical protein | ALQ52_01317 | Not Available | Negative | 4114572 - 4115006 | 15781.6 |
| sigma-54 dependent transcriptional regulator | ALQ52_01318 | Not Available | Positive | 4115168 - 4116493 | 49315.8 |
| nicotinamide mononucleotide transporter | ALQ52_01319 | Not Available | Negative | 4117012 - 4117575 | 21101.4 |
| response regulator receiver:transcriptional regulatory protein | ALQ52_03367 | Not Available | Positive | 4118599 - 4119270 | 24589.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
