Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cannabina |
| Strain | pv. alisalensis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1240775 bp
Thymine Count
1238714 bp
Guanine Count
1760399 bp
Cytosine Count
1758280 bp
Genome Length
6023770 bp
Protein-coding Genes
4941 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hrps | ALQ52_01164 | Not Available | Negative | 3910249 - 3911157 | 33181.3 |
| hrpr | ALQ52_01165 | Not Available | Negative | 3911203 - 3912147 | 35018.5 |
| slt-like protein | ALQ52_01166 | Not Available | Negative | 3913230 - 3914837 | 58375.8 |
| avirulence protein avrf | ALQ52_100174 | Not Available | Negative | 3920150 - 3920539 | 14413.2 |
| hopm1 | ALQ52_03720 | Not Available | Negative | 3920617 - 3922914 | 80048.8 |
| shcm | ALQ52_01168 | Not Available | Negative | 3922911 - 3923405 | 17951.4 |
| hrpwpma | ALQ52_01169 | Not Available | Positive | 3923708 - 3924982 | 43030.8 |
| type iii effector hopptoa1pma | ALQ52_03721 | Not Available | Negative | 3925067 - 3926767 | 59393.1 |
| type iii effector locus protein | ALQ52_102830 | Not Available | Positive | 3926838 - 3927848 | 37773.0 |
| glycine cleavage system transcriptional activator | ALQ52_100684 | Not Available | Negative | 3927895 - 3928851 | 35424.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
