Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylfumaryl-coa isomerase | SAMN04244553_1046 | Not Available | Negative | 885860 - 887074 | 42606.4 |
| helix-turn-helix domain-containing protein | SAMN04244553_1047 | Not Available | Negative | 887543 - 888421 | 33166.2 |
| transcriptional regulator of acetoin/glycerol metabolism | SAMN04244553_1048 | Not Available | Positive | 888618 - 890219 | 57218.9 |
| 2-methylcitrate dehydratase prpd | SAMN04244553_1049 | Not Available | Negative | 890372 - 891805 | 51794.5 |
| regulatory protein, luxr family | SAMN04244553_1050 | Not Available | Negative | 891910 - 892962 | 37241.6 |
| ribose transport system permease protein | SAMN04244553_1051 | Not Available | Positive | 893207 - 894226 | 34538.7 |
| ribose transport system substrate-binding protein | SAMN04244553_1052 | Not Available | Positive | 894272 - 895345 | 37617.6 |
| ribose transport system permease protein | SAMN04244553_1053 | Not Available | Positive | 895352 - 897520 | 77684.0 |
| hypothetical protein | SAMN04244553_1054 | Not Available | Positive | 897517 - 898599 | 38865.9 |
| monosaccharide abc transporter atp-binding protein, cut2 family (tc 3.a.1.2.-) | SAMN04244553_1055 | Not Available | Positive | 898605 - 900113 | 54924.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

