Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_0205 | Not Available | Negative | 5782 - 6027 | 9117.14 |
| uncharacterized membrane protein | SAMN04244553_0207 | Not Available | Negative | 6927 - 7766 | 27545.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_0208 | Not Available | Negative | 7799 - 8662 | 30519.2 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_0209 | Not Available | Positive | 8747 - 9208 | 17424.8 |
| pentapeptide repeat-containing protein | SAMN04244553_0210 | Not Available | Positive | 9895 - 10857 | 35080.4 |
| superfamily ii dna and rna helicase | SAMN04244553_0212 | Not Available | Negative | 12548 - 13906 | 47858.6 |
| lsr2 protein | SAMN04244553_0214 | Not Available | Positive | 15137 - 15457 | 11598.6 |
| dna binding domain-containing protein, excisionase family | SAMN04244553_0215 | Not Available | Positive | 16094 - 16384 | 10528.5 |
| Trna-pro | Not Available | Not Available | Positive | 17974 - 18050 | Not Available |
| hypothetical protein | SAMN04244553_0218 | Not Available | Negative | 18248 - 19003 | 26688.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

