Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-methylacyl-coa racemase | SAMN04244553_1036 | Not Available | Positive | 874842 - 875999 | 41017.4 |
| enoyl-coa hydratase | SAMN04244553_1037 | Not Available | Positive | 876011 - 876802 | 28210.9 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN04244553_1038 | Not Available | Positive | 876799 - 877974 | 41301.4 |
| transcriptional regulator, gntr family | SAMN04244553_1039 | Not Available | Positive | 877974 - 878630 | 24416.1 |
| acyl-coa dehydrogenase | SAMN04244553_1040 | Not Available | Positive | 878667 - 879815 | 41358.9 |
| acetyl-coa c-acetyltransferase | SAMN04244553_1041 | Not Available | Positive | 879829 - 881046 | 42497.7 |
| hypothetical protein | SAMN04244553_1042 | Not Available | Positive | 881141 - 881359 | 8127.03 |
| 2-methylcitrate dehydratase prpd | SAMN04244553_1043 | Not Available | Negative | 881419 - 882813 | 49072.7 |
| acyl-coa reductase | SAMN04244553_1044 | Not Available | Negative | 882840 - 884321 | 52800.1 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN04244553_1045 | Not Available | Positive | 884600 - 885772 | 42401.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

