Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase inso and inactivated derivatives | SAMN04244553_1001 | Not Available | Positive | 842152 - 843039 | 33937.2 |
| thioredoxin | SAMN04244553_1003 | Not Available | Positive | 843572 - 844030 | 16612.7 |
| chitin binding peritrophin-a domain-containing protein | SAMN04244553_1005 | Not Available | Negative | 844635 - 844811 | 6563.5 |
| hypothetical protein | SAMN04244553_1006 | Not Available | Positive | 845558 - 846031 | 17209.0 |
| hypothetical protein | SAMN04244553_1007 | Not Available | Positive | 846178 - 846549 | 13273.7 |
| hypothetical protein | SAMN04244553_1008 | Not Available | Positive | 846832 - 847284 | 15686.5 |
| hypothetical protein | SAMN04244553_1010 | Not Available | Negative | 847835 - 847990 | 5472.31 |
| hypothetical protein | SAMN04244553_1011 | Not Available | Positive | 848223 - 848654 | 15490.4 |
| hypothetical protein | SAMN04244553_1012 | Not Available | Negative | 848687 - 849151 | 15897.7 |
| hypothetical protein | SAMN04244553_1013 | Not Available | Negative | 850721 - 850933 | 7858.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

