Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_0977 | Not Available | Positive | 823068 - 824435 | 48887.4 |
| membrane protein | SAMN04244553_0978 | Not Available | Negative | 824495 - 825361 | 30896.5 |
| hypothetical protein | SAMN04244553_0979 | Not Available | Negative | 825421 - 826428 | 38025.9 |
| dyp-type peroxidase family | SAMN04244553_0980 | Not Available | Negative | 826425 - 827759 | 49091.2 |
| hypothetical protein | SAMN04244553_0981 | Not Available | Negative | 827777 - 828337 | 21166.2 |
| phospholipase_d-nuclease n-terminal | SAMN04244553_0982 | Not Available | Positive | 828767 - 829180 | 15086.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04244553_0983 | Not Available | Negative | 829190 - 830080 | 32682.9 |
| nad(p)h-dependent fmn reductase | SAMN04244553_0984 | Not Available | Positive | 830233 - 830817 | 20831.8 |
| conserved hypothetical protein | SAMN04244553_0985 | Not Available | Positive | 830828 - 831280 | 16540.7 |
| transcriptional regulator, tetr family | SAMN04244553_0986 | Not Available | Positive | 831434 - 832048 | 21933.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

