Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase | SAMN04244553_0957 | Not Available | Negative | 800731 - 801357 | 22173.2 |
| carboxylate-amine ligase | SAMN04244553_0958 | Not Available | Negative | 801384 - 802544 | 41949.1 |
| hypothetical protein | SAMN04244553_0959 | Not Available | Positive | 802683 - 805586 | 105861.0 |
| poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) | SAMN04244553_0960 | Not Available | Negative | 805610 - 806719 | 40181.9 |
| hypothetical protein | SAMN04244553_0961 | Not Available | Positive | 806761 - 807510 | 28404.4 |
| snoal-like domain-containing protein | SAMN04244553_0962 | Not Available | Negative | 807512 - 807955 | 16513.7 |
| transcriptional regulator, tetr family | SAMN04244553_0963 | Not Available | Negative | 808035 - 808706 | 24168.6 |
| cholesterol oxidase | SAMN04244553_0964 | Not Available | Negative | 808791 - 810362 | 55300.2 |
| secretory lipase | SAMN04244553_0965 | Not Available | Negative | 810450 - 811778 | 45722.4 |
| geranylgeranyl reductase family | SAMN04244553_0966 | Not Available | Negative | 811892 - 814072 | 78367.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

