Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN04244553_0947 | Not Available | Negative | 791928 - 793079 | 39810.5 |
| hypothetical protein | SAMN04244553_0948 | Not Available | Positive | 793470 - 794549 | 37888.4 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04244553_0949 | Not Available | Positive | 794546 - 795028 | 17952.2 |
| hypothetical protein | SAMN04244553_0950 | Not Available | Negative | 795036 - 795728 | 25654.0 |
| amino acid transporter | SAMN04244553_0951 | Not Available | Negative | 795894 - 797447 | 55349.9 |
| hypothetical protein | SAMN04244553_0952 | Not Available | Negative | 797558 - 797881 | 10845.9 |
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | SAMN04244553_0953 | Not Available | Positive | 798059 - 799432 | 48452.4 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN04244553_0954 | Not Available | Negative | 799434 - 799847 | 15112.9 |
| hypothetical protein | SAMN04244553_0955 | Not Available | Negative | 799915 - 800307 | 13386.5 |
| hypothetical protein | SAMN04244553_0956 | Not Available | Positive | 800406 - 800639 | 8332.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

