Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04244553_0937 | Not Available | Positive | 780299 - 781105 | 30349.4 |
| l-2,4-diaminobutyric acid acetyltransferase | SAMN04244553_0938 | Not Available | Positive | 781224 - 781802 | 21156.2 |
| diaminobutyrate aminotransferase apoenzyme | SAMN04244553_0939 | Not Available | Positive | 781799 - 783109 | 47070.7 |
| l-ectoine synthase | SAMN04244553_0940 | Not Available | Positive | 783106 - 783501 | 14513.1 |
| ectoine hydroxylase | SAMN04244553_0941 | Not Available | Positive | 783517 - 784413 | 33034.8 |
| hypothetical protein | SAMN04244553_0942 | Not Available | Negative | 784552 - 785769 | 43657.2 |
| hypothetical protein | SAMN04244553_0943 | Not Available | Negative | 785769 - 785990 | 7726.29 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN04244553_0944 | Not Available | Positive | 786177 - 788279 | 75705.0 |
| serine/threonine protein kinase | SAMN04244553_0945 | Not Available | Negative | 788280 - 790532 | 82103.7 |
| 23s rrna (adenine-n6)-dimethyltransferase | SAMN04244553_0946 | Not Available | Negative | 790681 - 791493 | 29730.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

