Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN04244553_0907 | Not Available | Positive | 747644 - 748504 | 31010.5 |
| hypothetical protein | SAMN04244553_0908 | Not Available | Positive | 748535 - 750427 | 68634.6 |
| hypothetical protein | SAMN04244553_0909 | Not Available | Positive | 750564 - 751835 | 44237.7 |
| polar amino acid transport system substrate-binding protein | SAMN04244553_0910 | Not Available | Positive | 751832 - 752800 | 34150.8 |
| hypothetical protein | SAMN04244553_0911 | Not Available | Positive | 752812 - 753978 | 41732.7 |
| serine/threonine-protein kinase pkng | SAMN04244553_0912 | Not Available | Positive | 753975 - 756374 | 83300.8 |
| serine/threonine protein phosphatase prpc | SAMN04244553_0913 | Not Available | Positive | 756371 - 757759 | 47825.1 |
| von willebrand factor type a domain-containing protein | SAMN04244553_0914 | Not Available | Positive | 757782 - 759068 | 45263.6 |
| forkhead associated (fha) domain, binds pser, pthr, ptyr | SAMN04244553_0915 | Not Available | Positive | 759068 - 759715 | 22311.2 |
| aaa domain-containing protein | SAMN04244553_0916 | Not Available | Positive | 759735 - 760289 | 19899.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

