Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence factor mce family protein | SAMN04244553_0897 | Not Available | Negative | 737919 - 738956 | 36621.0 |
| abc-type transporter mla maintaining outer membrane lipid asymmetry, component mlad | SAMN04244553_0898 | Not Available | Negative | 738953 - 740011 | 37011.1 |
| virulence factor mce family protein | SAMN04244553_0899 | Not Available | Negative | 740008 - 741105 | 38562.8 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04244553_0900 | Not Available | Negative | 741109 - 742143 | 37303.4 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04244553_0901 | Not Available | Negative | 742131 - 743153 | 35799.6 |
| abc-type transporter mla maintaining outer membrane lipid asymmetry, component mlad | SAMN04244553_0902 | Not Available | Negative | 743150 - 744211 | 37065.2 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04244553_0903 | Not Available | Negative | 744216 - 745082 | 30217.5 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04244553_0904 | Not Available | Negative | 745084 - 745929 | 29040.1 |
| transcriptional regulator, tetr family | SAMN04244553_0905 | Not Available | Positive | 746274 - 746897 | 22438.8 |
| transcriptional regulator, tetr family | SAMN04244553_0906 | Not Available | Positive | 746881 - 747525 | 24103.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

