Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN04244553_0865 | Not Available | Negative | 702214 - 702792 | 21093.5 |
| excinuclease abc, a subunit | SAMN04244553_0866 | Not Available | Positive | 702895 - 705189 | 82417.3 |
| transcriptional regulator, tetr family | SAMN04244553_0867 | Not Available | Negative | 705265 - 705834 | 20679.7 |
| hypothetical protein | SAMN04244553_0869 | Not Available | Positive | 706504 - 706968 | 16721.5 |
| dna-binding transcriptional regulator, merr family | SAMN04244553_0870 | Not Available | Negative | 706955 - 707707 | 27170.3 |
| erythromycin esterase | SAMN04244553_0871 | Not Available | Positive | 707789 - 708994 | 43997.7 |
| phosphoglycolate phosphatase | SAMN04244553_0872 | Not Available | Negative | 708981 - 709607 | 21745.1 |
| alpha/beta hydrolase fold | SAMN04244553_0873 | Not Available | Negative | 709629 - 711245 | 58591.0 |
| phenylacetate-coa ligase | SAMN04244553_0874 | Not Available | Positive | 711317 - 712783 | 53802.7 |
| n-acetylglucosaminyl-diphospho-decaprenol l-rhamnosyltransferase | SAMN04244553_0875 | Not Available | Positive | 713166 - 714041 | 31544.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

