Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | SAMN04244553_0855 | Not Available | Negative | 693721 - 695238 | 54523.9 |
| transcriptional regulatory protein, c terminal | SAMN04244553_0856 | Not Available | Negative | 695339 - 696559 | 44066.3 |
| hypothetical protein | SAMN04244553_0857 | Not Available | Positive | 696654 - 697082 | 15872.8 |
| acid stress chaperone hdea | SAMN04244553_0858 | Not Available | Negative | 697096 - 697410 | 10981.1 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04244553_0859 | Not Available | Negative | 697512 - 698654 | 39882.6 |
| hypothetical protein | SAMN04244553_0860 | Not Available | Negative | 698695 - 699009 | 11666.4 |
| transcriptional regulator, tetr family | SAMN04244553_0861 | Not Available | Negative | 699105 - 699725 | 21832.2 |
| nucleoside-diphosphate-sugar epimerase | SAMN04244553_0862 | Not Available | Positive | 699834 - 700916 | 39013.0 |
| hypothetical protein | SAMN04244553_0863 | Not Available | Positive | 700928 - 701260 | 11747.4 |
| probable f420-dependent oxidoreductase, msmeg_2516 family | SAMN04244553_0864 | Not Available | Positive | 701323 - 702201 | 31716.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

