Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine biosynthesis protein metw | SAMN04244553_0178 | Not Available | Positive | 7362100 - 7362699 | 22040.6 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04244553_0179 | Not Available | Negative | 7362764 - 7363903 | 40695.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMN04244553_0180 | Not Available | Negative | 7363893 - 7364975 | 38904.8 |
| hypothetical protein | SAMN04244553_0181 | Not Available | Positive | 7365227 - 7367407 | 79702.7 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN04244553_0182 | Not Available | Positive | 7367466 - 7367951 | 16868.9 |
| uncharacterized conserved protein ybar, trm112 family | SAMN04244553_0183 | Not Available | Positive | 7367962 - 7368180 | 7814.4 |
| transcriptional regulator, tetr family | SAMN04244553_0184 | Not Available | Negative | 7368478 - 7369251 | 27037.5 |
| abc-2 type transport system permease protein | SAMN04244553_0185 | Not Available | Negative | 7369248 - 7370042 | 28409.3 |
| abc-2 type transport system atp-binding protein | SAMN04244553_0186 | Not Available | Negative | 7370039 - 7370770 | 26083.2 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN04244553_0187 | Not Available | Negative | 7370848 - 7372407 | 57580.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

