Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small multidrug resistance pump | SAMN04244553_0168 | Not Available | Positive | 7349168 - 7349491 | 11005.0 |
| threonine dehydratase | SAMN04244553_0169 | Not Available | Negative | 7349520 - 7350740 | 41915.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN04244553_0170 | Not Available | Negative | 7350789 - 7351967 | 42179.6 |
| hypothetical protein | SAMN04244553_0171 | Not Available | Negative | 7352186 - 7352536 | 12621.2 |
| isopentenyl-diphosphate delta-isomerase | SAMN04244553_0172 | Not Available | Negative | 7353114 - 7353692 | 20547.4 |
| geranyl diphosphate 2-c-methyltransferase | SAMN04244553_0173 | Not Available | Negative | 7353689 - 7354561 | 32455.2 |
| 2-methylisoborneol synthase | SAMN04244553_0174 | Not Available | Negative | 7354593 - 7356263 | 58078.5 |
| cyclic nucleotide-binding domain-containing protein | SAMN04244553_0175 | Not Available | Negative | 7356279 - 7357685 | 51644.5 |
| protein of unknown function | SAMN04244553_0176 | Not Available | Positive | 7358012 - 7358797 | 28657.0 |
| putative long chain acyl-coa synthase | SAMN04244553_0177 | Not Available | Positive | 7358970 - 7361915 | 106353.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

