Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_0784 | Not Available | Positive | 619874 - 620800 | 33027.9 |
| doxx-like family protein | SAMN04244553_0785 | Not Available | Positive | 620970 - 621455 | 17302.2 |
| uncharacterized membrane protein hded, duf308 family | SAMN04244553_0786 | Not Available | Positive | 621572 - 622144 | 19903.0 |
| subtilase family protein | SAMN04244553_0787 | Not Available | Positive | 622182 - 623633 | 50248.5 |
| hypothetical protein | SAMN04244553_0788 | Not Available | Positive | 624131 - 625504 | 49396.9 |
| hypothetical protein | SAMN04244553_0789 | Not Available | Positive | 625704 - 626459 | 27811.1 |
| uncharacterized protein | SAMN04244553_0790 | Not Available | Positive | 626579 - 627799 | 43840.1 |
| macrolide transport system atp-binding/permease protein | SAMN04244553_0791 | Not Available | Positive | 627993 - 629618 | 58424.1 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_0792 | Not Available | Negative | 629653 - 630846 | 39488.7 |
| transcriptional regulator, badm/rrf2 family | SAMN04244553_0793 | Not Available | Negative | 630907 - 631386 | 17686.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

