Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase beta subunit | SAMN04244553_0127 | Not Available | Positive | 7306336 - 7308840 | 88916.1 |
| short-chain dehydrogenase | SAMN04244553_0128 | Not Available | Negative | 7308904 - 7309671 | 26117.8 |
| uncharacterized conserved protein, duf427 family | SAMN04244553_0129 | Not Available | Positive | 7309882 - 7310172 | 11080.8 |
| hypothetical protein | SAMN04244553_0130 | Not Available | Positive | 7310238 - 7311005 | 27592.4 |
| hypothetical protein | SAMN04244553_0131 | Not Available | Positive | 7311046 - 7311552 | 17276.0 |
| hypothetical protein | SAMN04244553_0132 | Not Available | Positive | 7311604 - 7312632 | 37558.1 |
| signal transduction histidine kinase | SAMN04244553_0133 | Not Available | Positive | 7312850 - 7315489 | 92866.6 |
| hypothetical protein | SAMN04244553_0134 | Not Available | Positive | 7315486 - 7315917 | 15160.4 |
| protein of unknown function | SAMN04244553_0135 | Not Available | Positive | 7315914 - 7316249 | 11917.6 |
| hypothetical protein | SAMN04244553_0136 | Not Available | Positive | 7316233 - 7316853 | 22598.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

