Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | SAMN04244553_0117 | Not Available | Positive | 7296538 - 7299588 | 110775.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_0118 | Not Available | Negative | 7300215 - 7300934 | 25400.9 |
| hypothetical protein | SAMN04244553_0119 | Not Available | Negative | 7301005 - 7301343 | 11971.1 |
| dinb superfamily protein | SAMN04244553_0120 | Not Available | Negative | 7301340 - 7301861 | 19476.7 |
| bacterial translation initiation factor 3 (bif-3) | SAMN04244553_0121 | Not Available | Positive | 7302204 - 7302857 | 23945.8 |
| lsu ribosomal protein l35p | SAMN04244553_0122 | Not Available | Positive | 7302931 - 7303125 | 7335.15 |
| lsu ribosomal protein l20p | SAMN04244553_0123 | Not Available | Positive | 7303224 - 7303604 | 14139.2 |
| rna methyltransferase, trmh family | SAMN04244553_0124 | Not Available | Positive | 7303619 - 7304443 | 28788.3 |
| hypothetical protein | SAMN04244553_0125 | Not Available | Positive | 7304470 - 7304997 | 18731.2 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN04244553_0126 | Not Available | Positive | 7305210 - 7306286 | 38806.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

