Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04244553_0107 | Not Available | Positive | 7283202 - 7284062 | 31582.5 |
| nucleotide-binding universal stress protein, uspa family | SAMN04244553_0108 | Not Available | Positive | 7284427 - 7284963 | 18751.3 |
| dna helicase iv | SAMN04244553_0109 | Not Available | Negative | 7285163 - 7287457 | 83581.0 |
| heme-degrading monooxygenase hmoa | SAMN04244553_0110 | Not Available | Negative | 7287536 - 7287883 | 12793.3 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04244553_0111 | Not Available | Negative | 7287894 - 7289270 | 49876.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN04244553_0112 | Not Available | Positive | 7289452 - 7290645 | 42193.2 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04244553_0113 | Not Available | Negative | 7290751 - 7292490 | 62554.1 |
| sigma 54 modulation/s30ea ribosomal protein c terminus | SAMN04244553_0114 | Not Available | Positive | 7292629 - 7293420 | 29120.6 |
| two-component system, narl family, response regulator | SAMN04244553_0115 | Not Available | Negative | 7293473 - 7294105 | 22571.6 |
| glycogen debranching enzyme (alpha-1,6-glucosidase) | SAMN04244553_0116 | Not Available | Positive | 7294335 - 7296419 | 75104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

