Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04244553_0087 | Not Available | Positive | 7260937 - 7261539 | 21760.9 |
| regulatory protein, luxr family | SAMN04244553_0088 | Not Available | Negative | 7261544 - 7262512 | 34595.9 |
| methyltransferase domain-containing protein | SAMN04244553_0089 | Not Available | Negative | 7262626 - 7263480 | 30861.4 |
| ssu ribosomal protein s1p | SAMN04244553_0090 | Not Available | Positive | 7263794 - 7265260 | 53874.3 |
| hypothetical protein | SAMN04244553_0091 | Not Available | Negative | 7265334 - 7266014 | 23973.3 |
| transcriptional regulator, tetr family | SAMN04244553_0092 | Not Available | Positive | 7266104 - 7266802 | 25315.2 |
| transcriptional regulator, tetr family | SAMN04244553_0093 | Not Available | Positive | 7266799 - 7267431 | 23717.5 |
| putative drug exporter of the rnd superfamily | SAMN04244553_0094 | Not Available | Negative | 7267400 - 7269655 | 78775.2 |
| ornithine cyclodeaminase | SAMN04244553_0095 | Not Available | Positive | 7269743 - 7270552 | 28424.2 |
| diaminopimelate decarboxylase | SAMN04244553_0096 | Not Available | Positive | 7270549 - 7271892 | 48559.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

