Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molydopterin dinucleotide binding domain-containing protein | SAMN04244553_0077 | Not Available | Positive | 7249926 - 7252385 | 89280.0 |
| polar amino acid transport system substrate-binding protein | SAMN04244553_0078 | Not Available | Positive | 7252736 - 7253641 | 31763.6 |
| amino acid abc transporter membrane protein, paat family | SAMN04244553_0079 | Not Available | Positive | 7253645 - 7254604 | 34862.9 |
| amino acid abc transporter atp-binding protein, paat family | SAMN04244553_0080 | Not Available | Positive | 7254601 - 7255395 | 29074.5 |
| hypothetical protein | SAMN04244553_0081 | Not Available | Negative | 7255545 - 7256081 | 17473.0 |
| dna-binding transcriptional regulator, lysr family | SAMN04244553_0082 | Not Available | Negative | 7256387 - 7257316 | 32485.2 |
| fad/fmn-containing dehydrogenase | SAMN04244553_0083 | Not Available | Positive | 7257388 - 7258761 | 47653.5 |
| spfh domain / band 7 family protein | SAMN04244553_0084 | Not Available | Positive | 7258871 - 7259755 | 31632.2 |
| hypothetical protein | SAMN04244553_0085 | Not Available | Positive | 7259765 - 7259941 | 6515.85 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_0086 | Not Available | Negative | 7260015 - 7260911 | 31515.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

