Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN04244553_0037 | Not Available | Positive | 7211348 - 7212091 | 25746.5 |
| myo-inositol-1(or 4)-monophosphatase | SAMN04244553_0038 | Not Available | Positive | 7212102 - 7212929 | 28411.0 |
| imidazole glycerol phosphate synthase subunit hisf | SAMN04244553_0039 | Not Available | Positive | 7212934 - 7213707 | 26829.0 |
| phosphoribosyl-amp cyclohydrolase | SAMN04244553_0040 | Not Available | Positive | 7213760 - 7214107 | 12614.7 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_0041 | Not Available | Negative | 7214120 - 7214623 | 18493.1 |
| hypothetical protein | SAMN04244553_0042 | Not Available | Negative | 7214768 - 7215361 | 20924.0 |
| peroxiredoxin q/bcp | SAMN04244553_0043 | Not Available | Negative | 7215433 - 7215894 | 16545.8 |
| anthranilate synthase, component i | SAMN04244553_0044 | Not Available | Positive | 7215997 - 7217715 | 60840.6 |
| trp region conserved hypothetical membrane protein | SAMN04244553_0045 | Not Available | Positive | 7217712 - 7218638 | 31502.8 |
| indole-3-glycerol phosphate synthase | SAMN04244553_0046 | Not Available | Positive | 7218822 - 7219640 | 28068.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

