Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfonate transport system atp-binding protein | SAMN04244553_0007 | Not Available | Positive | 7182923 - 7183705 | 28003.6 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | SAMN04244553_0008 | Not Available | Positive | 7183702 - 7185054 | 49701.2 |
| hypothetical protein | SAMN04244553_0009 | Not Available | Positive | 7185152 - 7185634 | 18155.7 |
| transcriptional regulator, tetr family | SAMN04244553_0010 | Not Available | Negative | 7185645 - 7186229 | 21330.5 |
| biotin synthase | SAMN04244553_0011 | Not Available | Positive | 7186357 - 7187370 | 36574.1 |
| hypothetical protein | SAMN04244553_0012 | Not Available | Positive | 7187380 - 7187607 | 8388.09 |
| protein of unknown function | SAMN04244553_0013 | Not Available | Positive | 7187607 - 7188266 | 22279.9 |
| protein of unknown function | SAMN04244553_0014 | Not Available | Positive | 7188357 - 7188890 | 20047.7 |
| hypothetical protein | SAMN04244553_0015 | Not Available | Positive | 7189119 - 7189301 | 7075.28 |
| hypothetical protein | SAMN04244553_0016 | Not Available | Negative | 7189368 - 7190801 | 52228.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

