Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN04244553_6702 | Not Available | Negative | 7172617 - 7173438 | 29018.8 |
| hypothetical protein | SAMN04244553_6703 | Not Available | Negative | 7173440 - 7173748 | 10552.5 |
| haloacid dehalogenase superfamily class (subfamily) iia | SAMN04244553_6704 | Not Available | Negative | 7173762 - 7174652 | 31306.9 |
| hypothetical protein | SAMN04244553_6705 | Not Available | Negative | 7175495 - 7176193 | 25024.2 |
| hypothetical protein | SAMN04244553_6706 | Not Available | Positive | 7177172 - 7177549 | 11995.2 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04244553_0002 | Not Available | Positive | 7178196 - 7178666 | 16817.6 |
| uncharacterized conserved protein (cog2071) | SAMN04244553_0003 | Not Available | Negative | 7178688 - 7179419 | 26614.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_0004 | Not Available | Positive | 7179794 - 7180855 | 38612.8 |
| sulfonate transport system substrate-binding protein | SAMN04244553_0005 | Not Available | Positive | 7180990 - 7182084 | 38605.0 |
| sulfonate transport system permease protein | SAMN04244553_0006 | Not Available | Positive | 7182084 - 7182947 | 30422.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

