Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_6672 | Not Available | Positive | 7140566 - 7142155 | 56639.2 |
| abc-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein | SAMN04244553_6673 | Not Available | Positive | 7142508 - 7143587 | 39022.9 |
| nitt/taut family transport system atp-binding protein | SAMN04244553_6674 | Not Available | Positive | 7143584 - 7144429 | 31192.5 |
| nitt/taut family transport system permease protein | SAMN04244553_6675 | Not Available | Positive | 7144422 - 7145285 | 30919.7 |
| fatty acid coa ligase fadd9 | SAMN04244553_6676 | Not Available | Negative | 7145499 - 7148987 | 126385.0 |
| acyl-acp thioesterase | SAMN04244553_6677 | Not Available | Negative | 7149100 - 7149858 | 28119.9 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04244553_6678 | Not Available | Negative | 7149907 - 7150452 | 20261.6 |
| protein of unknown function | SAMN04244553_6679 | Not Available | Negative | 7150532 - 7150891 | 13031.8 |
| hypothetical protein | SAMN04244553_6680 | Not Available | Positive | 7151012 - 7151893 | 31065.1 |
| arac-type dna-binding protein | SAMN04244553_6681 | Not Available | Negative | 7152050 - 7152490 | 15848.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

