Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_6632 | Not Available | Positive | 7103993 - 7104541 | 19030.9 |
| oligopeptide transport system substrate-binding protein | SAMN04244553_6633 | Not Available | Positive | 7104679 - 7106304 | 58813.2 |
| hypothetical protein | SAMN04244553_6634 | Not Available | Positive | 7106398 - 7106904 | 18481.1 |
| dna-binding transcriptional regulator, merr family | SAMN04244553_6635 | Not Available | Positive | 7106942 - 7107736 | 28965.8 |
| hth domain-containing protein | SAMN04244553_6636 | Not Available | Positive | 7107812 - 7108513 | 25751.1 |
| hypothetical protein | SAMN04244553_6637 | Not Available | Positive | 7108607 - 7108987 | 13191.3 |
| probable f420-dependent oxidoreductase, rv1855c family | SAMN04244553_6638 | Not Available | Negative | 7109087 - 7109962 | 31743.9 |
| monoamine oxidase | SAMN04244553_6639 | Not Available | Negative | 7110005 - 7111327 | 46091.4 |
| transcriptional regulator, tetr family | SAMN04244553_6640 | Not Available | Positive | 7111391 - 7111960 | 20171.0 |
| ef-hand domain pair | SAMN04244553_6641 | Not Available | Negative | 7112110 - 7112316 | 7930.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

