Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_6582 | Not Available | Negative | 7037370 - 7038218 | 29854.5 |
| regulatory protein, luxr family | SAMN04244553_6583 | Not Available | Positive | 7038231 - 7038812 | 21765.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_6584 | Not Available | Negative | 7038820 - 7039605 | 27534.7 |
| transcriptional regulator, tetr family | SAMN04244553_6585 | Not Available | Negative | 7039725 - 7040354 | 23668.9 |
| dna-binding transcriptional regulator, pucr family | SAMN04244553_6586 | Not Available | Negative | 7040386 - 7041633 | 44523.7 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_6587 | Not Available | Positive | 7041763 - 7043280 | 55969.0 |
| serine aminopeptidase, s33 | SAMN04244553_6588 | Not Available | Positive | 7043277 - 7044212 | 33152.5 |
| isochorismate synthase | SAMN04244553_6589 | Not Available | Negative | 7044287 - 7045429 | 40237.7 |
| abc-2 family transporter protein | SAMN04244553_6590 | Not Available | Positive | 7045719 - 7045976 | 9304.88 |
| hypothetical protein | SAMN04244553_6591 | Not Available | Positive | 7046095 - 7046319 | 8095.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

