Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04244553_6552 | Not Available | Positive | 7006511 - 7007281 | 27105.7 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_6553 | Not Available | Positive | 7007370 - 7008620 | 41631.1 |
| abc-2 type transport system permease protein | SAMN04244553_6554 | Not Available | Negative | 7008540 - 7010159 | 55867.8 |
| abc-2 type transport system atp-binding protein | SAMN04244553_6555 | Not Available | Negative | 7010156 - 7011070 | 32814.5 |
| hypothetical protein | SAMN04244553_6556 | Not Available | Positive | 7011279 - 7011566 | 9837.88 |
| protein of unknown function duf302 | SAMN04244553_6557 | Not Available | Negative | 7011664 - 7012554 | 31299.1 |
| nucleotide-binding universal stress protein, uspa family | SAMN04244553_6558 | Not Available | Positive | 7012930 - 7013796 | 30330.0 |
| transcriptional regulator, marr family | SAMN04244553_6559 | Not Available | Negative | 7013807 - 7014244 | 15541.8 |
| polyhydroxybutyrate depolymerase | SAMN04244553_6560 | Not Available | Positive | 7014311 - 7015231 | 31894.3 |
| predicted metal-dependent peptidase | SAMN04244553_6561 | Not Available | Negative | 7015471 - 7016706 | 44938.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

